Diverse Eukaryotic Microbiota in Wild Baboons Revealed

Table of Contents

Eukaryotic Diversity in Wild Baboon Gut Microbiomes

Eukaryotic organisms, including fungi, protists, and helminths, play crucial roles in the gut microbiomes of mammals. In wild baboons from the Amboseli ecosystem, shotgun metagenomic sequencing revealed the presence of various eukaryotic taxa, primarily from the kingdoms Protista, Chromista, and Fungi. Notably, 90.7% of analyzed samples contained protists, while 46.7% showed evidence of Chromista, and 20.3% of samples had fungal presence (Chege et al., 2025). This study identified the most prevalent species, including Entamoeba coli, Enteromonas hominis, and Blastocystis subtypes, which suggest a complex interaction between these microorganisms and their host.

The methods used to analyze gut eukaryotic diversity were comprehensive, utilizing both EukDetect and gutprotist-search pipelines, which provided robust frameworks for identifying and characterizing the eukaryotic communities present in the baboons’ gut microbiomes.

Eukaryotic Taxon Prevalence (%)
Entamoeba coli 74.66
Enteromonas hominis 53.33
Blastocystis subtype 3 38.66
Iodamoeba sp. 36.00
Chilomastix mensnili 34.70

Impact of Social Groups on Gut Microbial Composition

Social structures significantly influence the composition of gut microbiomes in wild baboons. In a study analyzing the gut eukaryotic diversity between two social groups, it was found that social group membership explained 11.2% of the global diversity in gut eukaryotic species composition. Baboons in larger social groups exhibited greater eukaryotic diversity than those in smaller groups (Chege et al., 2025). This finding indicates that social interactions and group dynamics may play a critical role in shaping gut microbiota, likely through mechanisms such as grooming, shared foraging, and social transmission of microorganisms.

Seasonal Changes Affecting Gut Eukaryotic Communities

While the influence of social group dynamics is profound, seasonal changes also play a role in the composition of gut eukaryotic communities. However, in contrast to bacterial communities, which have shown significant seasonal variation, eukaryotic community composition in wild baboons did not exhibit substantial differences between the wet and dry seasons in this study (Chege et al., 2025). This observation suggests that eukaryotic communities may be more stable in the face of seasonal environmental changes compared to their bacterial counterparts.

Predominant Eukaryotic Species in Wild Baboons

The predominant eukaryotic species in the baboon gut microbiome have important health implications. The presence of Entamoeba coli and various Blastocystis subtypes has been commonly associated with both commensal and pathogenic roles in primates (Chege et al., 2025). Understanding the abundance and diversity of these eukaryotic taxa can provide insights into the health status of the baboons, as certain species may influence immune responses and susceptibility to diseases.

Implications for Primate Health and Microbiome Research

The findings from studies investigating the gut eukaryotic diversity in wild baboons underscore the importance of considering eukaryotic members alongside bacterial communities in microbiome research. As these microorganisms can impact host health, understanding their roles and interactions is crucial for developing effective conservation and management strategies for wild primate populations. Furthermore, these insights contribute to the broader field of microbiome research, highlighting the need for a more comprehensive approach to studying the complex interactions within host-associated microbiomes.

FAQ

What eukaryotic organisms are found in the gut microbiome of wild baboons?

The gut microbiome of wild baboons contains a variety of eukaryotic organisms from the kingdoms Protista, Chromista, and Fungi, including species such as Entamoeba coli, Enteromonas hominis, and Blastocystis subtypes.

How does social group membership affect gut microbiota composition in baboons?

Social group membership influences gut microbiota composition, with baboons in larger social groups exhibiting greater eukaryotic diversity compared to those in smaller groups. This may be due to increased interactions and shared resources among group members.

Are there seasonal variations in the gut eukaryotic communities of baboons?

Unlike bacterial communities, eukaryotic communities in wild baboons showed no significant differences between wet and dry seasons, suggesting that eukaryotic taxa may be more stable across seasonal changes.

What are the health implications of gut eukaryotic diversity in baboons?

The presence and diversity of eukaryotic taxa can impact the health status of baboons, influencing immune responses and susceptibility to various diseases.

How can this research contribute to primate conservation?

Understanding the gut microbiota of wild baboons can inform conservation strategies by highlighting the health implications of microbial diversity and the potential impacts of environmental and social factors on their gut health.

References

  1. Chege, M. N., Ferretti, P., Webb, S., Macharia, R. W., Obiero, G., Kamau, J., Alberts, S. C., Tung, J., & Akinyi, M. Y. (2025). Eukaryotic composition across seasons and social groups in the gut microbiota of wild baboons. Animal Microbiome, 5(1), 80. https://doi.org/10.1186/s42523-025-00436-6
  2. Liu, L., Oza, S., Hogan, D., Perin, J., Rudan, I., Lawn, J. E., Cousens, S., Mathers, C., Black, R. E., & Campbell, H. (2015). Global, regional, and national causes of child mortality in 2000–13, with projections to inform post-2015 priorities: An updated systematic analysis. Lancet, 385(9966), 430–440 14)61698-6
  3. Rudan, I., Boschi-Pinto, C., Biloglav, Z., Mulholland, K., & Campbell, H. (2010). Epidemiology and etiology of childhood pneumonia. Bull World Health Organ, 86(5), 408–416
  4. Vayssier-Taussat, M., Albina, E., Citti, C., Cosson, J. F., Jacques, M. A., Lebrun, M. H., Le Loir, Y., & Ogliastro, M. (2014). Shifting the paradigm from pathogens to pathobiome: New concepts in the light of meta-omics. Front Cell Infect Microbiol, 4, 29
  5. Tung, J., Barreiro, L. B., Burns, M. B., Grenier, J. C., Lynch, J., Grieneisen, L. E., & Altmann, J. (2015). Social networks predict gut microbiome composition in wild baboons. Elife, 4, e05224
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